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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015868057.1_cds_XP_016433346.1_29509
CDS Infomation

[gene=LOC107759847] [db_xref=GeneID:107759847] [protein=aspartyl protease APCB1-like isoform X2] [protein_id=XP_016433346.1] [location=join(7175..7206,7726..7843,8239..8468,8549..8785,9223..9376,9472..9557,9983..10097,10208..10280,10615..10727)] [gbkey=CDS]
Sequence

ATGGACTTCAAGCCAGGCAAAGAACTAAATTGGTTGTACTACACATATATGCTTGTGGGG
AATCCTCCTAAGCCTTATTTTCTTGATATCGATACGGGAAGTGACTTGATGTGGATCCAA
TGTGATGCTCCATGCACTAGCTGTGCCAAGGGAGCCCACCCATTGTACAAGCCCAGAAAT
GTCAATATGATACCTCCAAAAAACCCCTATTGTGTTGAGGTTCAAGAGAATCTCAGGTCC
AAGTATTGTGATAACTGCCATCAATGTGATTATGAGATAGAATATGCCGACCACAGCTCT
TCTGTTGGGGTTCTTGCAAAAGATACACTTCAATTGGTGCTTGCAAATGGGACAGGAACC
AAGTCAGATGTTGTTTTCGGCTGTGCATATGATCAGCAAGGCACACTTCTCAACACGCTA
GCAAACACCGATGGGATCCTTGGACTTAGCAGAGCTCCAATCAGTTTACCTTCTCAGCTA
GCAAGCCATGGGTTCATCAACAATGTTATTGGACATTGTCTTGGCACTGATACAAATGGG
GGCTACTTGTTTTTAGGCAATGATTTTGTCCCACATTGGCGAATGTCATGGGTCCCTATG
CTGAATGCCCCTTTTCTAAATCTTTATCAAGCAGGATTGATGAAAATGAACTATGGAAGA
AAAGAACTCCAATTAGGCAGCATGAGAGATGGAAAAGGAACTGTAGTGTTTGACAGTGGC
AGTACTTACACTTATTTCACAAATCAAGGATATAAAGCTTTAATTTCCATGCTTGAAGAG
ATTTCTAGTGAAGATCTTATCAAAGATGCATCAGACACGACATTACCCATTTGCTGGCGA
GCTAAATTTCCAGTAAGGTCTATTACAGAGGTAAGGCAATTCTTCAAACCACTAAACCTT
CAATTTGGAAGCAAGTGGCGTATAGCGTCCACAAAGCTCTCGATTCCTGCAGAGGGGTAT
TTGACTACAAGTGAAAAGGGTAATGTGTGTTTAGGTATACTTGACGGAAGCAATATTCAT
GATGGTTCTGCTATAATACTTGGAGATATTTCACTACGTGGTCAGTTGTTCGTATATGAC
AATGTTAACGAGAAGATTGGATGGATAAGATCAAATTGTGAACGGCCACAGAAACTTTTG
AGTCTTCCATTTTTTTGA

Peptide Sequence

PEP ID

XP_016433346.1
PEP Infomation

PREDICTED: aspartyl protease APCB1-like isoform X2 [Nicotiana tabacum]
Sequence

MDFKPGKELNWLYYTYMLVGNPPKPYFLDIDTGSDLMWIQCDAPCTSCAKGAHPLYKPRN
VNMIPPKNPYCVEVQENLRSKYCDNCHQCDYEIEYADHSSSVGVLAKDTLQLVLANGTGT
KSDVVFGCAYDQQGTLLNTLANTDGILGLSRAPISLPSQLASHGFINNVIGHCLGTDTNG
GYLFLGNDFVPHWRMSWVPMLNAPFLNLYQAGLMKMNYGRKELQLGSMRDGKGTVVFDSG
STYTYFTNQGYKALISMLEEISSEDLIKDASDTTLPICWRAKFPVRSITEVRQFFKPLNL
QFGSKWRIASTKLSIPAEGYLTTSEKGNVCLGILDGSNIHDGSAIILGDISLRGQLFVYD
NVNEKIGWIRSNCERPQKLLSLPFF

Transcript Sequence

Gene sequence data has not been registered.